STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001441535_02344Unannotated protein. (238 aa)    
Predicted Functional Partners:
GCA_001441535_02341
Unannotated protein.
 
  
 0.933
GCA_001441535_02343
Unannotated protein.
       0.796
GCA_001441535_02340
Unannotated protein.
 
  
 0.701
GCA_001441535_00909
Unannotated protein.
  
     0.496
GCA_001441535_00908
Unannotated protein.
  
     0.471
GCA_001441535_02342
Unannotated protein.
 
    0.470
GCA_001441535_01114
Unannotated protein.
  
     0.431
Your Current Organism:
Altererythrobacter troitsensis
NCBI taxonomy Id: 292222
Other names: Altererythrobacter troitsensis Nedashkovskaya et al. 2013, KCTC 12303, KMM 6042, Sphingomonadaceae bacterium KMM 6042, strain JCM 17037
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.