STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF62950.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
ABF62752.1
Glycosyl transferase family 14.
  
     0.673
ABF63319.1
Hypothetical protein.
  
     0.671
ABF64186.1
Hypothetical protein.
  
     0.666
ABF62745.1
ABC transporter permease protein.
  
     0.650
ABF62751.1
Hypothetical protein.
  
     0.635
ABF65413.1
Hypothetical protein.
  
     0.624
ABF64468.1
Hypothetical protein.
  
     0.616
ABF62753.1
Hypothetical protein.
  
     0.607
ABF65412.1
Hypothetical protein.
  
     0.600
ABF65219.1
Hypothetical protein.
  
     0.588
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.