STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63360.1annotation not available (153 aa)    
Predicted Functional Partners:
ABF63500.1
annotation not available
  
     0.754
ABF64516.1
annotation not available
  
     0.680
ABF65732.1
annotation not available
  
     0.583
ABF64680.1
annotation not available
  
     0.490
ABF65383.1
annotation not available
  
     0.458
ABF64607.1
annotation not available
  
     0.453
ABF64699.1
annotation not available
  
     0.448
ABF63263.1
annotation not available
  
     0.444
ABF64180.1
annotation not available
  
     0.438
ABF64184.1
annotation not available
  
     0.420
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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