STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63360.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
ABF64699.1
Putative CheA signal transduction histidine kinase.
  
     0.650
ABF62823.1
Heparinase II/III-like protein.
  
     0.630
ABF64495.1
Hypothetical protein.
  
     0.565
ABF63405.1
Hypothetical protein.
  
     0.539
ABF64840.1
Hypothetical protein.
  
     0.526
ABF65729.1
Hypothetical protein.
  
     0.526
ABF65732.1
Conserved domain protein.
  
     0.522
ABF65730.1
Extracellular solute-binding protein family 3.
  
     0.500
ABF64315.1
Phage shock protein A, PspA.
  
     0.486
ABF65413.1
Hypothetical protein.
  
     0.485
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.