STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63988.1acyl-CoA dehydrogenase-like protein. (407 aa)    
Predicted Functional Partners:
ABF64295.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.980
ABF64971.1
acyl-CoA dehydrogenase-like protein.
  
  
 
0.919
ABF63829.1
Dihydrolipoamide dehydrogenase.
  
 0.908
ABF65507.1
Dihydrolipoamide dehydrogenase.
  
 0.908
ABF65158.1
Electron transfer flavoprotein alpha subunit.
 
 0.862
ABF65159.1
Electron transfer flavoprotein beta-subunit.
 
 
 0.823
ABF65156.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.819
ABF63093.1
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.812
ABF65132.1
Non-ribosomal peptide synthase.
  
 0.777
ABF62846.1
AMP-dependent synthetase and ligase.
  
 0.644
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.