Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABF63810.1 | ABF65507.1 | TM1040_1077 | TM1040_2775 | Dihydrolipoamide acetyltransferase long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Dihydrolipoamide dehydrogenase. | 0.995 |
| ABF63810.1 | gcvH | TM1040_1077 | TM1040_2392 | Dihydrolipoamide acetyltransferase long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.722 |
| ABF63810.1 | gcvP | TM1040_1077 | TM1040_2391 | Dihydrolipoamide acetyltransferase long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.724 |
| ABF63810.1 | lipA | TM1040_1077 | TM1040_1371 | Dihydrolipoamide acetyltransferase long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.551 |
| ABF63846.1 | gcvP | TM1040_1113 | TM1040_2391 | Transketolase; Belongs to the transketolase family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.483 |
| ABF63846.1 | lipA | TM1040_1113 | TM1040_1371 | Transketolase; Belongs to the transketolase family. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.556 |
| ABF63968.1 | lipA | TM1040_1235 | TM1040_1371 | GTP-binding protein TypA. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.526 |
| ABF63968.1 | lpxA | TM1040_1235 | TM1040_1404 | GTP-binding protein TypA. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.502 |
| ABF64103.1 | ABF64105.1 | TM1040_1370 | TM1040_1372 | Peptidase M20D amidohydrolase. | Hypothetical protein. | 0.477 |
| ABF64103.1 | lipA | TM1040_1370 | TM1040_1371 | Peptidase M20D amidohydrolase. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.784 |
| ABF64105.1 | ABF64103.1 | TM1040_1372 | TM1040_1370 | Hypothetical protein. | Peptidase M20D amidohydrolase. | 0.477 |
| ABF64105.1 | lipA | TM1040_1372 | TM1040_1371 | Hypothetical protein. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.582 |
| ABF65507.1 | ABF63810.1 | TM1040_2775 | TM1040_1077 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide acetyltransferase long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.995 |
| ABF65507.1 | ABF65508.1 | TM1040_2775 | TM1040_2776 | Dihydrolipoamide dehydrogenase. | Branched-chain alpha-keto acid dehydrogenase E2 component. | 0.999 |
| ABF65507.1 | gcvH | TM1040_2775 | TM1040_2392 | Dihydrolipoamide dehydrogenase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.979 |
| ABF65507.1 | gcvP | TM1040_2775 | TM1040_2391 | Dihydrolipoamide dehydrogenase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.951 |
| ABF65507.1 | lipA | TM1040_2775 | TM1040_1371 | Dihydrolipoamide dehydrogenase. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.596 |
| ABF65508.1 | ABF65507.1 | TM1040_2776 | TM1040_2775 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Dihydrolipoamide dehydrogenase. | 0.999 |
| ABF65508.1 | gcvH | TM1040_2776 | TM1040_2392 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.722 |
| ABF65508.1 | gcvP | TM1040_2776 | TM1040_2391 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.724 |
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