node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF62822.1 | ABF63425.1 | TM1040_0089 | TM1040_0692 | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.539 |
ABF62822.1 | ABF64756.1 | TM1040_0089 | TM1040_2024 | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | ATP-dependent DNA helicase, Rep family. | 0.689 |
ABF62822.1 | ligA | TM1040_0089 | TM1040_1398 | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DNA ligase NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.885 |
ABF62822.1 | polA | TM1040_0089 | TM1040_2764 | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.647 |
ABF62822.1 | recG | TM1040_0089 | TM1040_1397 | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DEAD/DEAH box helicase-like protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.400 |
ABF62822.1 | ruvB | TM1040_0089 | TM1040_2371 | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.542 |
ABF63425.1 | ABF62822.1 | TM1040_0692 | TM1040_0089 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.539 |
ABF63425.1 | ABF64756.1 | TM1040_0692 | TM1040_2024 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | ATP-dependent DNA helicase, Rep family. | 0.567 |
ABF63425.1 | ligA | TM1040_0692 | TM1040_1398 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA ligase NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.578 |
ABF63425.1 | polA | TM1040_0692 | TM1040_2764 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.599 |
ABF63425.1 | recG | TM1040_0692 | TM1040_1397 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | DEAD/DEAH box helicase-like protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.584 |
ABF63425.1 | ruvB | TM1040_0692 | TM1040_2371 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.569 |
ABF63425.1 | uvrA | TM1040_0692 | TM1040_1098 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.608 |
ABF63425.1 | uvrB | TM1040_0692 | TM1040_0144 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.548 |
ABF63425.1 | uvrD | TM1040_0692 | TM1040_2846 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily. | 0.422 |
ABF64756.1 | ABF62822.1 | TM1040_2024 | TM1040_0089 | ATP-dependent DNA helicase, Rep family. | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.689 |
ABF64756.1 | ABF63425.1 | TM1040_2024 | TM1040_0692 | ATP-dependent DNA helicase, Rep family. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.567 |
ABF64756.1 | ligA | TM1040_2024 | TM1040_1398 | ATP-dependent DNA helicase, Rep family. | DNA ligase NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.887 |
ABF64756.1 | polA | TM1040_2024 | TM1040_2764 | ATP-dependent DNA helicase, Rep family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.808 |
ABF64756.1 | recG | TM1040_2024 | TM1040_1397 | ATP-dependent DNA helicase, Rep family. | DEAD/DEAH box helicase-like protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.712 |