STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64383.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
ABF64382.1
Hypothetical protein.
       0.779
ABF64384.1
Hypothetical protein.
       0.773
ABF64385.1
Hypothetical protein.
       0.773
ABF64387.1
Hypothetical protein.
       0.632
ABF64386.1
Hypothetical protein.
       0.631
ABF64388.1
Hypothetical protein.
       0.631
ABF64381.1
Hypothetical protein.
       0.554
ABF64380.1
Hypothetical protein.
       0.426
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.