ABF64485.1 protein (Ruegeria sp. TM1040) - STRING interaction network

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Score

ABF64485.1

Cold-shock DNA-binding protein family. (68 aa)

Predicted Functional Partners:

ABF64486.1

0.773

rpoZ

0.501

rpoB

0.493

rpoA

0.487

rpmE

0.431

rpsL

0.419

rpmJ

0.403

Your Current Organism:

Ruegeria sp. TM1040

NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABF64485.1	ABF64486.1	TM1040_1752	TM1040_1753	Cold-shock DNA-binding protein family.	Hypothetical protein.	0.773
ABF64485.1	rpmE	TM1040_1752	TM1040_2617	Cold-shock DNA-binding protein family.	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.431
ABF64485.1	rpmJ	TM1040_1752	TM1040_0125	Cold-shock DNA-binding protein family.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.403
ABF64485.1	rpoA	TM1040_1752	TM1040_0279	Cold-shock DNA-binding protein family.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.487
ABF64485.1	rpoB	TM1040_1752	TM1040_0234	Cold-shock DNA-binding protein family.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.493
ABF64485.1	rpoZ	TM1040_1752	TM1040_2566	Cold-shock DNA-binding protein family.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.501
ABF64485.1	rpsL	TM1040_1752	TM1040_0239	Cold-shock DNA-binding protein family.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.419
ABF64486.1	ABF64485.1	TM1040_1753	TM1040_1752	Hypothetical protein.	Cold-shock DNA-binding protein family.	0.773
rpmE	ABF64485.1	TM1040_2617	TM1040_1752	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	Cold-shock DNA-binding protein family.	0.431
rpmE	rpmJ	TM1040_2617	TM1040_0125	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.991
rpmE	rpoA	TM1040_2617	TM1040_0279	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.502
rpmE	rpoB	TM1040_2617	TM1040_0234	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.413
rpmE	rpoZ	TM1040_2617	TM1040_2566	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.434
rpmE	rpsL	TM1040_2617	TM1040_0239	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.988
rpmJ	ABF64485.1	TM1040_0125	TM1040_1752	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	Cold-shock DNA-binding protein family.	0.403
rpmJ	rpmE	TM1040_0125	TM1040_2617	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.991
rpmJ	rpoA	TM1040_0125	TM1040_0279	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.944
rpmJ	rpoB	TM1040_0125	TM1040_0234	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.890
rpmJ	rpoZ	TM1040_0125	TM1040_2566	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.433
rpmJ	rpsL	TM1040_0125	TM1040_0239	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.995