STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64677.1annotation not available (136 aa)    
Predicted Functional Partners:
ABF64241.1
annotation not available
  
     0.749
ABF65085.1
annotation not available
  
     0.741
ABF64851.1
annotation not available
  
     0.736
ABF65084.1
annotation not available
  
     0.720
ABF64173.1
annotation not available
  
     0.719
ABF63825.1
annotation not available
  
     0.711
ABF64607.1
annotation not available
  
     0.709
ABF64083.1
annotation not available
  
     0.703
ABF63735.1
Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
  
     0.695
ABF65045.1
annotation not available
  
     0.693
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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