STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64972.1Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (267 aa)    
Predicted Functional Partners:
ABF64975.1
NADH:flavin oxidoreductase/NADH oxidase.
 
 
 0.959
ABF64973.1
Transcriptional regulator, MarR family.
 
    0.953
ABF64974.1
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.942
ABF64971.1
acyl-CoA dehydrogenase-like protein.
 
 0.935
ABF64970.1
AMP-dependent synthetase and ligase.
 
 
 0.928
ABF64964.1
Thioesterase superfamily.
 
    0.864
ABF64963.1
Endoribonuclease L-PSP.
 
     0.841
pleC
Histidine kinase.
   
 
 0.772
arcB
Multi-sensor hybrid histidine kinase.
   
 
 0.771
hik-2
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.771
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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