STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65273.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
ABF64793.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.659
ABF63087.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.607
ABF65524.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.561
ABF65331.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.491
rdxB
Iron-sulfur-binding protein; RdxA/RdxB/FixG family.
  
    0.484
rbxH
RbxH protein; putative.
       0.479
ABF64329.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.466
ABF63409.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.425
ABF63201.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.404
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.