STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcpGannotation not available (498 aa)    
Predicted Functional Partners:
cheR3
annotation not available
 
 
 0.771
cheR5
annotation not available
 
 
 0.765
ABF65380.1
annotation not available
       0.763
cheR4
annotation not available
 
 
 0.689
ABF65618.1
annotation not available
  
 
 0.513
flgG
annotation not available
  
 
 0.476
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein
 
  
 0.476
fliG
annotation not available
 
 
 0.468
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system
 
  
 0.456
fliI
annotation not available
 
   0.454
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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