STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_0046FAD linked oxidase. (348 aa)    
Predicted Functional Partners:
Tbd_0047
Glycolate oxidase, subunit GlcD.
  
  0.998
Tbd_0044
Glycolate oxidase (iron-sulfur subunit) protein.
 
 0.997
Tbd_2311
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.914
Tbd_2509
Alanine-glyoxylate transaminase.
  
 
 0.905
cbbZ
2-phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.902
Tbd_1562
Putative hydrolase.
    
 0.901
Tbd_0048
Conserved hypothetical protein.
       0.777
Tbd_0045
Probable ring-cleaving dioxygenase.
     
 0.775
Tbd_0043
Conserved hypothetical protein.
     
 0.706
Tbd_0049
Conserved hypothetical protein.
       0.705
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.