STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_0077Nitrite reductase (NO-forming). (575 aa)    
Predicted Functional Partners:
Tbd_0561
Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
 
 0.996
Tbd_0823
Nitric-oxide reductase subunit B.
 
 0.994
Tbd_0562
Nitric-oxide reductase subunit C.
 
 
  0.993
Tbd_0822
Nitric oxide reductase, cytochrome c-containing subunit.
 
 
  0.987
Tbd_0072
Possible Transcriptional Regulator, AsnC family.
 
    0.974
Tbd_1403
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.960
Tbd_0075
Heme d1 biosynthesis protein NirF.
 
 
 0.950
Tbd_1404
Nitrate reductase, beta subunit.
   
 0.943
Tbd_0073
Possible Transcriptional Regulator, AsnC family.
 
  
 0.941
Tbd_0071
Elongator protein 3/MiaB/NifB.
  
 0.923
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.