STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_0078Regulator of nitric oxide reductase transcription. (625 aa)    
Predicted Functional Partners:
Tbd_1389
Nitrous-oxide reductase.
 
  
 0.984
Tbd_1391
Nitrous oxidase accessory protein.
  
 0.979
Tbd_1393
ABC transporter transmembrane protein.
 
  
 0.951
Tbd_0823
Nitric-oxide reductase subunit B.
 
  
 0.942
Tbd_0561
Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.940
Tbd_1394
Putative lipoprotein involved in nitrous oxide reduction.
 
  
 0.884
Tbd_1392
ABC transporter ATPase.
 
  
 0.859
Tbd_0075
Heme d1 biosynthesis protein NirF.
 
  
 0.796
Tbd_0072
Possible Transcriptional Regulator, AsnC family.
  
    0.791
Tbd_0073
Possible Transcriptional Regulator, AsnC family.
  
    0.757
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.