STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_0136Two component Transcriptional regulator, Winged helix family. (220 aa)    
Predicted Functional Partners:
Tbd_0135
Periplasmic Sensor Signal Transduction Histidine Kinase.
 0.996
Tbd_2792
Periplasmic Sensor Signal Transduction Histidine Kinase.
 
 0.983
Tbd_2791
Two component Transcriptional regulator, Winged helix family.
  
  
 
0.905
Tbd_2610
Periplasmic Sensor Signal Transduction Histidine Kinase.
  
 
 0.826
Tbd_1288
Periplasmic Sensor Signal Transduction Histidine Kinase.
 
 0.808
Tbd_2353
Periplasmic Sensor Signal Transduction Histidine Kinase.
 
 0.808
Tbd_0217
PAS/PAC Sensor Signal Transduction Histidine Kinase.
 
 0.804
Tbd_2279
Histidine Kinase.
  
 
 0.803
Tbd_2671
Periplasmic Sensor Hybrid Histidine Kinase.
 
 0.776
Tbd_0137
Diheme cytochrome c.
       0.773
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.