Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tbd_0570 | Tbd_0571 | Tbd_0570 | Tbd_0571 | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | DMSO reductase chain B. | 0.998 |
Tbd_0570 | Tbd_0572 | Tbd_0570 | Tbd_0572 | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | DMSO reductase chain C. | 0.989 |
Tbd_0570 | Tbd_0872 | Tbd_0570 | Tbd_0872 | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Adenylylsulfate reductase, alpha subunit. | 0.906 |
Tbd_0570 | Tbd_0873 | Tbd_0570 | Tbd_0873 | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Adenylylsulfate reductase, beta subunit. | 0.907 |
Tbd_0570 | Tbd_2282 | Tbd_0570 | Tbd_2282 | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Adenylylsulfate reductase, alpha subunit. | 0.906 |
Tbd_0570 | Tbd_2283 | Tbd_0570 | Tbd_2283 | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Adenylylsulfate reductase, beta subunit. | 0.907 |
Tbd_0570 | cysC | Tbd_0570 | Tbd_0210 | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Sulfate adenylyltranferase, adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.919 |
Tbd_0570 | sat | Tbd_0570 | Tbd_0874 | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | ATP-sulfurylase; Belongs to the sulfate adenylyltransferase family. | 0.903 |
Tbd_0571 | Tbd_0570 | Tbd_0571 | Tbd_0570 | DMSO reductase chain B. | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.998 |
Tbd_0571 | Tbd_0572 | Tbd_0571 | Tbd_0572 | DMSO reductase chain B. | DMSO reductase chain C. | 0.990 |
Tbd_0571 | Tbd_0872 | Tbd_0571 | Tbd_0872 | DMSO reductase chain B. | Adenylylsulfate reductase, alpha subunit. | 0.915 |
Tbd_0571 | Tbd_0873 | Tbd_0571 | Tbd_0873 | DMSO reductase chain B. | Adenylylsulfate reductase, beta subunit. | 0.901 |
Tbd_0571 | Tbd_2282 | Tbd_0571 | Tbd_2282 | DMSO reductase chain B. | Adenylylsulfate reductase, alpha subunit. | 0.915 |
Tbd_0571 | Tbd_2283 | Tbd_0571 | Tbd_2283 | DMSO reductase chain B. | Adenylylsulfate reductase, beta subunit. | 0.901 |
Tbd_0571 | cysC | Tbd_0571 | Tbd_0210 | DMSO reductase chain B. | Sulfate adenylyltranferase, adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.904 |
Tbd_0571 | sat | Tbd_0571 | Tbd_0874 | DMSO reductase chain B. | ATP-sulfurylase; Belongs to the sulfate adenylyltransferase family. | 0.911 |
Tbd_0572 | Tbd_0570 | Tbd_0572 | Tbd_0570 | DMSO reductase chain C. | DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.989 |
Tbd_0572 | Tbd_0571 | Tbd_0572 | Tbd_0571 | DMSO reductase chain C. | DMSO reductase chain B. | 0.990 |
Tbd_0572 | Tbd_0872 | Tbd_0572 | Tbd_0872 | DMSO reductase chain C. | Adenylylsulfate reductase, alpha subunit. | 0.900 |
Tbd_0572 | Tbd_0873 | Tbd_0572 | Tbd_0873 | DMSO reductase chain C. | Adenylylsulfate reductase, beta subunit. | 0.905 |
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