STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_0914Hypothetical protein containing twin-arginine translocation pathway signal. (488 aa)    
Predicted Functional Partners:
Tbd_0820
Cytochrome c peroxidase.
  
 
 0.802
Tbd_0917
Sulfur oxidation protein SoxX.
  
 
 0.705
Tbd_0913
Hypothetical protein.
  
    0.659
Tbd_2468
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
   0.606
tolB
Probable tolB-related transport protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.604
Tbd_0915
Hypothetical protein.
       0.568
Tbd_0341
Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.564
Tbd_0916
Conserved hypothetical protein.
       0.528
Tbd_0561
Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
   
 
 0.504
Tbd_0823
Nitric-oxide reductase subunit B.
   
 
 0.504
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.