STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azoRAcyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (216 aa)    
Predicted Functional Partners:
Tbd_1118
Conserved hypothetical protein DUF209; Belongs to the pirin family.
  
  
 0.716
Tbd_1116
Transcriptional regulatory protein, LysR family.
     
 0.539
queG
4Fe-4S ferredoxin protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.
 
      0.507
Tbd_1119
Putative lipoprotein.
       0.482
proB
Glutamate 5-kinase, ProB-related; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.482
Tbd_1121
Alpha-ribazole-5`-phosphate phosphatase CobC, putative.
       0.482
Tbd_1122
Probable substrate-binding periplasmic (PBP) ABC transporter protein.
       0.482
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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