STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_1669Oligopeptide ABC transporter permease protein. (468 aa)    
Predicted Functional Partners:
Tbd_1668
Oligopeptidee ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
Tbd_1670
Oligopeptide ABC transporter permease protein.
 
 0.999
Tbd_1671
Oligopeptide ABC transporter periplasmic component.
 
  
 0.979
Tbd_2292
ABC phosphonate transport system ATPase.
 
     0.872
Tbd_1667
Hypothetical protein.
       0.714
Tbd_1672
Enoyl-(acyl-carrier-protein) reductase (NADH).
       0.628
Tbd_1239
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.437
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.