STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_2009Probable integral membrane protein. (227 aa)    
Predicted Functional Partners:
Tbd_2007
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.773
Tbd_2008
ATP-dependent helicase HrpA.
       0.773
Tbd_0972
Predicted signal transduction protein containing EAL and modified HD-GYP domains.
  
     0.705
Tbd_0638
Conserved hypothetical protein.
  
     0.647
Tbd_2159
Predicted signal transduction protein containing EAL and modified HD-GYP domains.
  
     0.622
Tbd_0056
Predicted signal transduction protein containing EAL and modified HD-GYP domains.
  
     0.621
Tbd_2010
Hypothetical protein.
       0.560
Tbd_2011
HAD-superfamily hydrolase.
       0.519
Tbd_0251
Conserved hypothetical protein.
  
     0.515
Tbd_1938
Putative diguanylate phosphodiesterase (EAL domain).
  
     0.504
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.