STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_2136Conserved hypothetical protein. (143 aa)    
Predicted Functional Partners:
Tbd_2137
Esterase/lipase/thioesterase family active site.
  
    0.790
Tbd_2135
Hypothetical protein.
  
    0.744
Tbd_2139
Putative lipopolysaccharide core biosynthesis glycosyl transferase protein.
 
     0.654
Tbd_2138
Phosphomannomutase.
       0.620
ilvE
Branched-chain amino acid aminotransferase I; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
       0.582
Tbd_0889
Conserved hypothetical protein.
  
     0.513
Tbd_2140
Probable magnesium and cobalt transport transmembrane protein.
       0.462
Tbd_2133
Putative ribonuclease I; Belongs to the RNase T2 family.
       0.432
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.