Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tbd_2139Putative lipopolysaccharide core biosynthesis glycosyl transferase protein. (364 aa)    
Predicted Functional Partners:
Tbd_2138
Phosphomannomutase.
  
  
 0.781
Tbd_2137
Esterase/lipase/thioesterase family active site.
       0.668
Tbd_2136
Conserved hypothetical protein.
 
     0.654
Tbd_2140
Probable magnesium and cobalt transport transmembrane protein.
       0.590
Tbd_0302
Glycosyltransferase.
 
    0.517
Tbd_1868
Putative glycosyltransferase.
  
     0.514
Tbd_0199
Putative glycosyltransferase.
  
  
 0.504
Tbd_1801
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.504
Tbd_1305
Conserved hypothetical protein.
  
     0.456
Tbd_2135
Hypothetical protein.
       0.456
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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