STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_2257Hypothetical protein. (134 aa)    
Predicted Functional Partners:
Tbd_2250
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.840
Tbd_2238
Putative membrane protein.
  
    0.622
Tbd_2239
Conserved hypothetical protein.
  
    0.622
Tbd_2772
Putative exported protein.
  
    0.622
Tbd_2256
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.495
Tbd_1979
Tryptophan repressor binding protein; Belongs to the WrbA family.
   
    0.487
Tbd_2311
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.456
Tbd_2255
Hypothetical protein.
       0.437
Tbd_2258
Putative glucose-fructose oxidoreductase oxidoreductase protein.
       0.430
Tbd_2626
Glucosyl-glycerol-phosphate synthase.
   
  
 0.429
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.