Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tbd_0987 | Tbd_1191 | Tbd_0987 | Tbd_1191 | Multi-sensor Hybrid Histidine Kinase. | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | 0.980 |
Tbd_0987 | Tbd_1598 | Tbd_0987 | Tbd_1598 | Multi-sensor Hybrid Histidine Kinase. | CheW protein. | 0.920 |
Tbd_0987 | Tbd_1617 | Tbd_0987 | Tbd_1617 | Multi-sensor Hybrid Histidine Kinase. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.930 |
Tbd_0987 | Tbd_1623 | Tbd_0987 | Tbd_1623 | Multi-sensor Hybrid Histidine Kinase. | CheW protein. | 0.673 |
Tbd_0987 | Tbd_1624 | Tbd_0987 | Tbd_1624 | Multi-sensor Hybrid Histidine Kinase. | CheA Signal Transduction Histidine Kinases (STHK). | 0.801 |
Tbd_0987 | Tbd_1625 | Tbd_0987 | Tbd_1625 | Multi-sensor Hybrid Histidine Kinase. | Response regulator receiver domain protein (CheY). | 0.704 |
Tbd_0987 | Tbd_2406 | Tbd_0987 | Tbd_2406 | Multi-sensor Hybrid Histidine Kinase. | Chemotaxis sensory transducer. | 0.951 |
Tbd_0987 | Tbd_2548 | Tbd_0987 | Tbd_2548 | Multi-sensor Hybrid Histidine Kinase. | CheA Signal Transduction Histidine Kinases (STHK). | 0.983 |
Tbd_0987 | cheB | Tbd_0987 | Tbd_1615 | Multi-sensor Hybrid Histidine Kinase. | Response regulator receiver domain protein (CheY); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.802 |
Tbd_1191 | Tbd_0987 | Tbd_1191 | Tbd_0987 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | Multi-sensor Hybrid Histidine Kinase. | 0.980 |
Tbd_1191 | Tbd_1598 | Tbd_1191 | Tbd_1598 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | CheW protein. | 0.994 |
Tbd_1191 | Tbd_1617 | Tbd_1191 | Tbd_1617 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.773 |
Tbd_1191 | Tbd_1623 | Tbd_1191 | Tbd_1623 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | CheW protein. | 0.949 |
Tbd_1191 | Tbd_1624 | Tbd_1191 | Tbd_1624 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | CheA Signal Transduction Histidine Kinases (STHK). | 0.914 |
Tbd_1191 | Tbd_1625 | Tbd_1191 | Tbd_1625 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | Response regulator receiver domain protein (CheY). | 0.611 |
Tbd_1191 | Tbd_2406 | Tbd_1191 | Tbd_2406 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | Chemotaxis sensory transducer. | 0.975 |
Tbd_1191 | Tbd_2548 | Tbd_1191 | Tbd_2548 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | CheA Signal Transduction Histidine Kinases (STHK). | 0.989 |
Tbd_1191 | cheB | Tbd_1191 | Tbd_1615 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | Response regulator receiver domain protein (CheY); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.933 |
Tbd_1191 | cheD | Tbd_1191 | Tbd_1616 | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation. | CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.550 |
Tbd_1598 | Tbd_0987 | Tbd_1598 | Tbd_0987 | CheW protein. | Multi-sensor Hybrid Histidine Kinase. | 0.920 |
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