Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Tbd_0248 | Tbd_1900 | Tbd_0248 | Tbd_1900 | ABC transporter, ATP-binding protein. | ABC transporter ATPase. | 0.908 |
| Tbd_0248 | msbA | Tbd_0248 | Tbd_2507 | ABC transporter, ATP-binding protein. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.905 |
| Tbd_0277 | msbA | Tbd_0277 | Tbd_2507 | ABC-2 type transporter ATPase. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.557 |
| Tbd_1583 | msbA | Tbd_1583 | Tbd_2507 | ABC transporter ATPase. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.601 |
| Tbd_1692 | dnaK | Tbd_1692 | Tbd_1538 | Putative ATPase. | Molecular chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.546 |
| Tbd_1692 | msbA | Tbd_1692 | Tbd_2507 | Putative ATPase. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.707 |
| Tbd_1900 | Tbd_0248 | Tbd_1900 | Tbd_0248 | ABC transporter ATPase. | ABC transporter, ATP-binding protein. | 0.908 |
| Tbd_1900 | msbA | Tbd_1900 | Tbd_2507 | ABC transporter ATPase. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.644 |
| Tbd_2506 | Tbd_2508 | Tbd_2506 | Tbd_2508 | Divalent cation transporter; Acts as a magnesium transporter. | Putative cell cycle control ATPase; Belongs to the TtcA family. | 0.800 |
| Tbd_2506 | msbA | Tbd_2506 | Tbd_2507 | Divalent cation transporter; Acts as a magnesium transporter. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.780 |
| Tbd_2508 | Tbd_2506 | Tbd_2508 | Tbd_2506 | Putative cell cycle control ATPase; Belongs to the TtcA family. | Divalent cation transporter; Acts as a magnesium transporter. | 0.800 |
| Tbd_2508 | msbA | Tbd_2508 | Tbd_2507 | Putative cell cycle control ATPase; Belongs to the TtcA family. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.773 |
| dnaK | Tbd_1692 | Tbd_1538 | Tbd_1692 | Molecular chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Putative ATPase. | 0.546 |
| dnaK | msbA | Tbd_1538 | Tbd_2507 | Molecular chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.562 |
| lpxK | msbA | Tbd_1508 | Tbd_2507 | tetraacyldisaccharide-1-P 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.950 |
| msbA | Tbd_0248 | Tbd_2507 | Tbd_0248 | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | ABC transporter, ATP-binding protein. | 0.905 |
| msbA | Tbd_0277 | Tbd_2507 | Tbd_0277 | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | ABC-2 type transporter ATPase. | 0.557 |
| msbA | Tbd_1583 | Tbd_2507 | Tbd_1583 | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | ABC transporter ATPase. | 0.601 |
| msbA | Tbd_1692 | Tbd_2507 | Tbd_1692 | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | Putative ATPase. | 0.707 |
| msbA | Tbd_1900 | Tbd_2507 | Tbd_1900 | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | ABC transporter ATPase. | 0.644 |
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