STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_2641Partition protein A. (212 aa)    
Predicted Functional Partners:
Tbd_2805
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.956
Tbd_2643
Bacterioferritin; Belongs to the bacterioferritin family.
 
     0.812
Tbd_2642
Conserved hypothetical protein.
       0.789
Tbd_2648
Carboxysome protein A.
 
     0.770
Tbd_2647
Carboxysome protein B.
 
     0.763
Tbd_2649
Carboxysome shell protein CsoS3, carbonic anhydrase epsilon.
 
   
 0.751
Tbd_2644
Carboxysome structural peptide CsoS1B.
       0.727
Tbd_2650
Carboxysome structural protein CsoS2.
 
     0.702
Tbd_2645
Carboxysome shell protein CsoS1A.
       0.693
Tbd_2720
Iron complex outermembrane recepter protein.
    
 
 0.620
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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