STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1020Conserved hypothetical protein. (118 aa)    
Predicted Functional Partners:
STH2037
Nitrogen fixation protein.
  
  
 0.806
STH1045
NifU-like nitrogen fixation protein.
  
 
 0.609
STH2390
Cysteine desulfurase.
  
  
 0.598
STH641
Cysteine desulfurase.
  
  
 0.598
STH1021
Conserved hypothetical protein.
       0.563
STH2034
ABC transporter ATP-binding protein.
  
 
 0.514
STH2035
Conserved hypothetical protein.
  
 
 0.495
STH2038
Conserved hypothetical protein.
  
 
 0.495
STH320
Putative glutaredoxin.
  
  
 0.484
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.466
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.