STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1029Putative N-acetylmuramoyl-L-alanine amidase. (777 aa)    
Predicted Functional Partners:
STH329
Sporulation specific N-acetylmuramoyl-L-alanine amidase.
 
 
 
0.930
STH3039
N-acetylmuramoyl-L-alanine amidase.
 
 
 
0.926
STH1205
Soprulation-specific penicillin-binding protein; Stage V sporulation protein.
 
  
 0.615
STH1718
Polysaccharide deacetylase.
  
  
 0.594
STH2392
Soprulation specific penicillin-binding protein; Stage V sporulation protein.
 
  
 0.594
STH1030
Aspartate aminotransferase.
  
    0.584
cinA
Competence-damage inducible protein; Belongs to the CinA family.
 
     0.539
STH3168
S-layer associated protein, putataive.
  
  
 0.503
STH1805
Putative poly A polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
 
 0.485
murD
UDP-N-acetylmuramoylalanine D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
     0.481
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.