STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1075Putative D-alanyl-D-alanine carboxypeptidase. (272 aa)    
Predicted Functional Partners:
STH989
D-alanyl-D-alanine carboxypeptidase-like protein; Belongs to the peptidase S11 family.
    
 0.914
STH1585
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.911
STH1815
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.911
STH2375
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.911
STH2587
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.911
STH437
Penicillin-binding protein.
     
 0.909
STH2662
Putative poly-gamma-glutamate biosynthesis enzyme.
      0.724
STH1076
Conserved hypothetical protein.
 
  
 0.602
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
   
 0.563
STH1074
Transcriptional regulator, CheY-like.
       0.518
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.