STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1108Oligopeptide ABC transporter permease protein. (336 aa)    
Predicted Functional Partners:
STH1109
Oligopeptide ABC transporter permease protein.
  
 0.960
STH1107
Oligopeptide ABC transporter substrate-binding protein.
   0.942
STH1110
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.911
STH1111
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.893
STH2652
Oligopeptide ABC transporter substrate-binding protein.
   0.859
STH2654
Oligopeptide ABC transporter permease protein.
  
 0.852
STH2313
Oligopeptide ABC transporter permease protein.
  
 0.850
STH1424
Oligopeptide ABC transporter permease protein.
  
 0.849
STH130
Oligopeptide ABC transporter permease protein.
  
 0.847
STH146
Oligopeptide ABC transporter permease protein.
  
 0.847
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.