Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STH1111Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (328 aa)    
Predicted Functional Partners:
STH1109
Oligopeptide ABC transporter permease protein.
 
 0.994
STH130
Oligopeptide ABC transporter permease protein.
 
 0.984
STH2743
Oligopeptide ABC transporter permease protein.
 
 0.980
STH1036
Oligopeptide ABC transporter permease protein.
 
 0.979
STH1424
Oligopeptide ABC transporter permease protein.
 
 0.979
STH146
Oligopeptide ABC transporter permease protein.
 
 0.978
STH149
Oligopeptide ABC transporter permease protein.
 
 0.977
STH2654
Oligopeptide ABC transporter permease protein.
 
 0.977
STH2313
Oligopeptide ABC transporter permease protein.
 
 0.962
STH1108
Oligopeptide ABC transporter permease protein.
 
 
 0.906
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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