STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1121Penicillin-binding protein. (953 aa)    
Predicted Functional Partners:
divIVA
Cell-division initiation protein.
   
 
 0.882
STH368
Hypothetical protein.
    
 
 0.818
STH2392
Soprulation specific penicillin-binding protein; Stage V sporulation protein.
 
 
 0.735
ftsW
Cell division protein; Belongs to the SEDS family.
  
 
 
 0.691
spoVD
Sporulation specific penicillin-binding protein.
 
 
 0.683
STH2132
Conserved hypothetical protein.
  
     0.677
spoVE-2
Stage V sporulation protein E; Belongs to the SEDS family.
  
 
 
 0.658
STH3327
Putative peptidase.
  
     0.653
spoVE
Stage V sporulation protein E; Belongs to the SEDS family.
  
 
 
 0.629
STH141
Cell wall-binding protein.
  
     0.627
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.