Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STH1123 | STH1224 | STH1123 | STH1224 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.747 |
STH1123 | STH1240 | STH1123 | STH1240 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.648 |
STH1123 | STH1431 | STH1123 | STH1431 | Conserved hypothetical protein. | Small acid-soluble spore protein. | 0.655 |
STH1123 | STH1558 | STH1123 | STH1558 | Conserved hypothetical protein. | ATP-dependent clp protease proteolytic subunit. | 0.713 |
STH1123 | STH1799 | STH1123 | STH1799 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.756 |
STH1123 | STH3270 | STH1123 | STH3270 | Conserved hypothetical protein. | Conserved membrane-associated protein. | 0.659 |
STH1123 | STH337 | STH1123 | STH337 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.696 |
STH1123 | spoIIE | STH1123 | STH3200 | Conserved hypothetical protein. | Stage II sporulation protein E. | 0.711 |
STH1123 | spoIIGA | STH1123 | STH1220 | Conserved hypothetical protein. | Sporulation-specific protease. | 0.754 |
STH1123 | spoIIM | STH1123 | STH1823 | Conserved hypothetical protein. | Stage II sporulation protein M. | 0.657 |
STH1224 | STH1123 | STH1224 | STH1123 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.747 |
STH1224 | STH1431 | STH1224 | STH1431 | Conserved hypothetical protein. | Small acid-soluble spore protein. | 0.572 |
STH1224 | STH1558 | STH1224 | STH1558 | Conserved hypothetical protein. | ATP-dependent clp protease proteolytic subunit. | 0.774 |
STH1224 | STH1799 | STH1224 | STH1799 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.746 |
STH1224 | STH337 | STH1224 | STH337 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.728 |
STH1224 | spoIIE | STH1224 | STH3200 | Conserved hypothetical protein. | Stage II sporulation protein E. | 0.721 |
STH1224 | spoIIGA | STH1224 | STH1220 | Conserved hypothetical protein. | Sporulation-specific protease. | 0.723 |
STH1224 | spoIIM | STH1224 | STH1823 | Conserved hypothetical protein. | Stage II sporulation protein M. | 0.436 |
STH1240 | STH1123 | STH1240 | STH1123 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.648 |
STH1240 | STH1431 | STH1240 | STH1431 | Conserved hypothetical protein. | Small acid-soluble spore protein. | 0.472 |
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