Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STH1303 | STH1305 | STH1303 | STH1305 | Putative DNA helicase. | Conserved hypothetical protein. | 0.862 |
STH1303 | STH1306 | STH1303 | STH1306 | Putative DNA helicase. | Putative DNA helicase. | 0.891 |
STH1303 | dinG | STH1303 | STH1713 | Putative DNA helicase. | ATP-dependent DNA helicase; 3'-5' exonuclease. | 0.424 |
STH1303 | polA | STH1303 | STH848 | Putative DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.720 |
STH1305 | STH1303 | STH1305 | STH1303 | Conserved hypothetical protein. | Putative DNA helicase. | 0.862 |
STH1305 | STH1306 | STH1305 | STH1306 | Conserved hypothetical protein. | Putative DNA helicase. | 0.957 |
STH1306 | STH1303 | STH1306 | STH1303 | Putative DNA helicase. | Putative DNA helicase. | 0.891 |
STH1306 | STH1305 | STH1306 | STH1305 | Putative DNA helicase. | Conserved hypothetical protein. | 0.957 |
STH1306 | STH2679 | STH1306 | STH2679 | Putative DNA helicase. | DNA polymerase I. | 0.951 |
STH1306 | STH2740 | STH1306 | STH2740 | Putative DNA helicase. | ATP-dependent helicase. | 0.976 |
STH1306 | STH3167 | STH1306 | STH3167 | Putative DNA helicase. | Pyruvate flavodoxin dehydrogenase. | 0.842 |
STH1306 | dinG | STH1306 | STH1713 | Putative DNA helicase. | ATP-dependent DNA helicase; 3'-5' exonuclease. | 0.976 |
STH1306 | polA | STH1306 | STH848 | Putative DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.964 |
STH1306 | rpoA | STH1306 | STH3047 | Putative DNA helicase. | RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.976 |
STH1306 | rpoB | STH1306 | STH3085 | Putative DNA helicase. | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.979 |
STH1306 | rpoZ | STH1306 | STH1340 | Putative DNA helicase. | RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.976 |
STH2679 | STH1306 | STH2679 | STH1306 | DNA polymerase I. | Putative DNA helicase. | 0.951 |
STH2679 | STH2740 | STH2679 | STH2740 | DNA polymerase I. | ATP-dependent helicase. | 0.735 |
STH2679 | dinG | STH2679 | STH1713 | DNA polymerase I. | ATP-dependent DNA helicase; 3'-5' exonuclease. | 0.848 |
STH2679 | polA | STH2679 | STH848 | DNA polymerase I. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.972 |
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