STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1430Small acid-soluble spore protein. (72 aa)    
Predicted Functional Partners:
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.807
STH203
Stage V sporulation protein AD.
  
    0.768
STH528
Conserved hypothetical protein.
 
     0.767
spoIIID
Stage III sporulation protein D.
  
    0.761
spoIIE
Stage II sporulation protein E.
  
     0.760
spoVT
Stage V sprulation protein T.
  
    0.753
spoIIIAD
Stage III sporulation protein AD.
  
     0.751
spoIIIG
RNA polymerase sigma factor similar to B. subtilis SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
    0.750
STH204
Stage V sporulation protein AE.
  
    0.747
spoIIR
pro-sigma-E processing factor SpoIIR.
  
     0.745
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.