STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIAAStage III sporulation protein AA. (292 aa)    
Predicted Functional Partners:
spoIIIAB
Stage III sporulation protein AB.
 
  
 0.998
spoIIIAH
Stage III sporulation protein AH.
 
  
 0.994
spoIIIAC
Stage III sporulation protein AC.
 
  
 0.990
spoIIIAG
Stage III sporulation protein AG.
 
  
 0.989
spoIIIAE
Stage III sporulation protein AE.
 
  
 0.970
spoIIIAD
Stage III sporulation protein AD.
 
  
 0.964
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.920
spoIIP
Stage II sporulation protein P.
  
   
 0.899
spoIIIAF
Stage III sporulation protein AF.
 
  
 0.895
spoIIR
pro-sigma-E processing factor SpoIIR.
  
  
 0.884
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.