STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1982Spore peptidoglycan hydrolase; N-acetylglucosaminidase. (419 aa)    
Predicted Functional Partners:
STH3265
Conserved hypothetical protein.
  
    0.600
STH1981
Conserved hypothetical protein.
       0.544
STH2959
Conserved hypothetical protein.
  
    0.544
gerKC2
Spore germination protein KC.
  
     0.538
STH1090
Conserved hypothetical protein.
  
    0.528
gerKA2
Spore germination protein KA.
  
     0.516
gerKA1
Spore germination protein KA.
  
     0.510
STH1983
Mannnose-6 phospate isomerase.
       0.486
gerXA
Spore germination protein KA.
  
     0.474
gerKC2-2
Spore germination protein KC.
  
     0.445
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.