STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH2236Pyridoxal phosphate biosynthetic protein variant; Belongs to the PdxA family. (116 aa)    
Predicted Functional Partners:
STH2235
Pyridoxal phosphate biosynthetic protein variant; Belongs to the PdxA family.
 
  
  0.994
STH2557
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
    
  0.903
STH2299
Conserved hypothetical protein.
     0.869
STH2229
Conserved hypothetical protein.
 
   
 0.653
STH2237
Group II intron-encoding maturase variant.
       0.636
STH2238
Group II intron-encoding maturase variant.
       0.636
STH2233
Iron-containing alcohol dehydrogenase.
       0.635
STH2234
Conserved hypothetical protein.
       0.632
STH2231
Phosphoglycerate dehydrogenase, C-terminal domain.
     
 0.623
STH2232
Phosphoglycerate dehydrogenase, N-terminal domain.
     
 0.623
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.