Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STH2367 | STH3167 | STH2367 | STH3167 | Phosphoglycolate phosphatase. | Pyruvate flavodoxin dehydrogenase. | 0.589 |
STH2367 | hisI | STH2367 | STH2832 | Phosphoglycolate phosphatase. | Histidine biosynthesis bifunctional protein; phosphoribosyl-AMP cyclohydrolase : phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family. | 0.467 |
STH2367 | moaA | STH2367 | STH2904 | Phosphoglycolate phosphatase. | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.613 |
STH2367 | mutT | STH2367 | STH2366 | Phosphoglycolate phosphatase. | Mutator MutT protein; Belongs to the Nudix hydrolase family. | 0.954 |
STH3167 | STH2367 | STH3167 | STH2367 | Pyruvate flavodoxin dehydrogenase. | Phosphoglycolate phosphatase. | 0.589 |
STH3167 | moaA | STH3167 | STH2904 | Pyruvate flavodoxin dehydrogenase. | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.418 |
hisI | STH2367 | STH2832 | STH2367 | Histidine biosynthesis bifunctional protein; phosphoribosyl-AMP cyclohydrolase : phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family. | Phosphoglycolate phosphatase. | 0.467 |
moaA | STH2367 | STH2904 | STH2367 | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | Phosphoglycolate phosphatase. | 0.613 |
moaA | STH3167 | STH2904 | STH3167 | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | Pyruvate flavodoxin dehydrogenase. | 0.418 |
mutT | STH2367 | STH2366 | STH2367 | Mutator MutT protein; Belongs to the Nudix hydrolase family. | Phosphoglycolate phosphatase. | 0.954 |