STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH2433Conserved hypothetical protein. (483 aa)    
Predicted Functional Partners:
STH2432
Putative beta-lactamase.
       0.603
STH3259
Arginine/lysine/ornithine decarboxylases.
 
     0.591
STH1440
Conserved hypothetical protein.
  
     0.582
STH1738
Aluminum resistance protein.
  
     0.550
STH3261
Putative chromosome replication initiation protein.
  
     0.538
STH597
Conserved hypothetical protein.
  
     0.538
STH2434
Hypothetical protein.
       0.532
ecfA1
ABC-type cobalt transport system ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.527
STH3269
Arginine/lysine/ornithine decarboxylases.
 
     0.524
STH2425
Putative Fe-S oxidoreductase.
 
     0.522
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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