STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH2682Putative sugar kinase. (305 aa)    
Predicted Functional Partners:
STH2697
Putative oxidoreductase.
 
  
 0.861
rbsD
Ribose ABC transporter permease protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.853
STH773
Ribose ABC transporter ATP-binding protein.
 
  
 0.842
STH2741
1-pyrroline-5 carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.807
STH646
1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.807
STH722
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.807
STH1117
Putative oxidoreductase.
  
  
 0.804
STH2799
Putative oxidoreductase.
  
  
 0.804
STH2683
Fructose-bisphosphate aldolase.
 
  
 0.789
hisA
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
    0.777
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.