Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STH2783 | STH2784 | STH2783 | STH2784 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.752 |
STH2783 | STH2785 | STH2783 | STH2785 | Conserved hypothetical protein. | Hypothetical protein. | 0.572 |
STH2783 | STH2786 | STH2783 | STH2786 | Conserved hypothetical protein. | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.572 |
STH2784 | STH2783 | STH2784 | STH2783 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.752 |
STH2784 | STH2785 | STH2784 | STH2785 | Conserved hypothetical protein. | Hypothetical protein. | 0.588 |
STH2784 | STH2786 | STH2784 | STH2786 | Conserved hypothetical protein. | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.588 |
STH2784 | nth | STH2784 | STH2787 | Conserved hypothetical protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.463 |
STH2785 | STH2783 | STH2785 | STH2783 | Hypothetical protein. | Conserved hypothetical protein. | 0.572 |
STH2785 | STH2784 | STH2785 | STH2784 | Hypothetical protein. | Conserved hypothetical protein. | 0.588 |
STH2785 | STH2786 | STH2785 | STH2786 | Hypothetical protein. | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.773 |
STH2785 | nth | STH2785 | STH2787 | Hypothetical protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.498 |
STH2786 | STH2783 | STH2786 | STH2783 | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | Conserved hypothetical protein. | 0.572 |
STH2786 | STH2784 | STH2786 | STH2784 | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | Conserved hypothetical protein. | 0.588 |
STH2786 | STH2785 | STH2786 | STH2785 | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | Hypothetical protein. | 0.773 |
STH2786 | nth | STH2786 | STH2787 | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.498 |
nth | STH2784 | STH2787 | STH2784 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | Conserved hypothetical protein. | 0.463 |
nth | STH2785 | STH2787 | STH2785 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | Hypothetical protein. | 0.498 |
nth | STH2786 | STH2787 | STH2786 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.498 |