Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STH1030 | hisC | STH1030 | STH2831 | Aspartate aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.934 |
STH1030 | tpl | STH1030 | STH2842 | Aspartate aminotransferase. | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | 0.900 |
STH2841 | tpl | STH2841 | STH2842 | Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | 0.584 |
STH2843 | tpl | STH2843 | STH2842 | Hypothetical protein. | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | 0.455 |
STH2942 | tpl | STH2942 | STH2842 | Aminopeptidase-like protein. | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | 0.620 |
hisC | STH1030 | STH2831 | STH1030 | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Aspartate aminotransferase. | 0.934 |
hisC | tpl | STH2831 | STH2842 | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | 0.913 |
tpl | STH1030 | STH2842 | STH1030 | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | Aspartate aminotransferase. | 0.900 |
tpl | STH2841 | STH2842 | STH2841 | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.584 |
tpl | STH2843 | STH2842 | STH2843 | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | Hypothetical protein. | 0.455 |
tpl | STH2942 | STH2842 | STH2942 | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | Aminopeptidase-like protein. | 0.620 |
tpl | hisC | STH2842 | STH2831 | Tyrosine phenol-lyase; Beta-tyrosinase; Belongs to the beta-eliminating lyase family. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.913 |