STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH3131Cysteine desulfurase. (389 aa)    
Predicted Functional Partners:
STH2037
Nitrogen fixation protein.
 
 
 0.981
STH2034
ABC transporter ATP-binding protein.
  
 0.922
STH2038
Conserved hypothetical protein.
 
 0.921
STH3130
Conserved hypothetical protein.
 
   
 0.913
STH3132
Conserved hypothetical protein.
 
     0.913
STH2035
Conserved hypothetical protein.
 
 0.907
dnaK
Chaperone protein, DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  
 0.521
STH3167
Pyruvate flavodoxin dehydrogenase.
  
  
 0.502
STH3133
Class III stress response-related ATPase; ATP-dependent Clp protease; Belongs to the ClpA/ClpB family.
  
    0.489
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP.
   
 0.464
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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