Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STH1025 | STH115 | STH1025 | STH115 | Acetyl-coenzyme A synthetase. | Pyruvate formate-lyase. | 0.908 |
STH1025 | STH2160 | STH1025 | STH2160 | Acetyl-coenzyme A synthetase. | Branched-chain alpha-keto acid dehydrogenase E2. | 0.913 |
STH1025 | STH2321 | STH1025 | STH2321 | Acetyl-coenzyme A synthetase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.911 |
STH1025 | STH2526 | STH1025 | STH2526 | Acetyl-coenzyme A synthetase. | Conserved hypothetical protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.900 |
STH1025 | STH3262 | STH1025 | STH3262 | Acetyl-coenzyme A synthetase. | Pyruvate ferredoxin oxidoreductase alpha-beta subunit. | 0.933 |
STH1025 | STH3264 | STH1025 | STH3264 | Acetyl-coenzyme A synthetase. | Pyruvate ferredoxin oxidoreductase gamma-delta subunit. | 0.927 |
STH1025 | STH616 | STH1025 | STH616 | Acetyl-coenzyme A synthetase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.837 |
STH1025 | STH722 | STH1025 | STH722 | Acetyl-coenzyme A synthetase. | Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.419 |
STH1025 | STH938 | STH1025 | STH938 | Acetyl-coenzyme A synthetase. | 3-hydroxyisobutyrate dehydrogenase. | 0.818 |
STH1025 | acsA | STH1025 | STH881 | Acetyl-coenzyme A synthetase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.909 |
STH115 | STH1025 | STH115 | STH1025 | Pyruvate formate-lyase. | Acetyl-coenzyme A synthetase. | 0.908 |
STH115 | STH2160 | STH115 | STH2160 | Pyruvate formate-lyase. | Branched-chain alpha-keto acid dehydrogenase E2. | 0.924 |
STH115 | STH2321 | STH115 | STH2321 | Pyruvate formate-lyase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.908 |
STH115 | STH2526 | STH115 | STH2526 | Pyruvate formate-lyase. | Conserved hypothetical protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.923 |
STH115 | STH3262 | STH115 | STH3262 | Pyruvate formate-lyase. | Pyruvate ferredoxin oxidoreductase alpha-beta subunit. | 0.938 |
STH115 | STH3264 | STH115 | STH3264 | Pyruvate formate-lyase. | Pyruvate ferredoxin oxidoreductase gamma-delta subunit. | 0.943 |
STH115 | STH616 | STH115 | STH616 | Pyruvate formate-lyase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.828 |
STH115 | STH938 | STH115 | STH938 | Pyruvate formate-lyase. | 3-hydroxyisobutyrate dehydrogenase. | 0.803 |
STH115 | acsA | STH115 | STH881 | Pyruvate formate-lyase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.908 |
STH2160 | STH1025 | STH2160 | STH1025 | Branched-chain alpha-keto acid dehydrogenase E2. | Acetyl-coenzyme A synthetase. | 0.913 |
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