STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AcrA1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (666 aa)    
Predicted Functional Partners:
PpsD
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.900
Pks13
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.874
Tgs2
Diacylglycerol O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the long-chain O-acyltransferase family.
 
  
 0.841
ORV48111.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.807
ORV57583.1
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.801
Mas
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.791
PpsC
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.791
ORV54901.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.791
Pks8
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.779
ORV48794.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.779
Your Current Organism:
Mycobacterium florentinum
NCBI taxonomy Id: 292462
Other names: CCUG 50992, CIP 108409, DSM 44852, JCM 14740, M. florentinum, Mycobacterium florentinum Tortoli et al. 2005, strain FI-93171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.