STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EphC_2Epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)    
Predicted Functional Partners:
ORV55341.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.896
ORV55481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.747
ORV54649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.703
BpoB
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.670
ORV49141.1
Haloalkane dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
PepA_2
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.613
ORV57540.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.588
ORV57499.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.588
ORV54648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.588
dhmA
Haloalkane dehalogenase; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons.
  
     0.573
Your Current Organism:
Mycobacterium florentinum
NCBI taxonomy Id: 292462
Other names: CCUG 50992, CIP 108409, DSM 44852, JCM 14740, M. florentinum, Mycobacterium florentinum Tortoli et al. 2005, strain FI-93171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.