STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV53198.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)    
Predicted Functional Partners:
ORV53171.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.858
ORV53169.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.807
ORV53172.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.805
ORV53197.1
Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.766
PpsD
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.750
ORV54858.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.743
Pks13
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.732
ORV48110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.722
Mas
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.712
PpsC
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.712
Your Current Organism:
Mycobacterium florentinum
NCBI taxonomy Id: 292462
Other names: CCUG 50992, CIP 108409, DSM 44852, JCM 14740, M. florentinum, Mycobacterium florentinum Tortoli et al. 2005, strain FI-93171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.