STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45988.1PFAM: Predicted methyltransferase regulatory domain; InterPro IPR013217:IPR018773; KEGG: syn:sll1526 hypothetical protein; PFAM: Methyltransferase regulatory domain, predicted; Methyltransferase type 12; SPTR: Uncharacterized protein sll1526. (505 aa)    
Predicted Functional Partners:
AFZ48358.1
KEGG: cyp:PCC8801_4004 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.555
AFZ46729.1
KEGG: mar:MAE_02710 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.554
AFZ46730.1
KEGG: mar:MAE_02700 hypothetical protein; SPTR: Similar to tr|P73706|P73706.
  
     0.553
AFZ46888.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: syn:slr0416 hypothetical protein; PFAM: protein of unknown function DUF29; SPTR: Slr0416 protein.
  
     0.547
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
  
 
 0.545
AFZ46265.1
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Sulfotransferase domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR000639:IPR009081:IPR006162:IPR018201:IPR 000873:IPR006163:IPR014030:IPR014031:IPR014043:IPR013968:I PR000863:IPR000073; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; AMP-dependent synthetase and ligase; Acyl transferase; KR do [...]
  
 
 0.545
AFZ45989.1
InterPro IPR010916; KEGG: ppd:Ppro_2533 prevent-host-death family protein; SPTR: Putative uncharacterized protein.
       0.436
AFZ45990.1
PFAM: Plasmid maintenance system killer protein; TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: ddf:DEFDS_0548 plasmid stabilization system; SPTR: Plasmid stabilization system.
       0.436
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.